SubtiBank SubtiBank
yjcK [2019-02-19 17:53:25]
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yjcK [2019-02-19 17:53:25]

similar to ribosomal-protein-alanine N-acetyltransferase
locus
BSU11890
pI
5.46
mw
20.78 kDa
protein length
181 aa Sequence Blast
gene length
546 bp Sequence Blast
function
unknown
product
unknown
essential
no
ec
2.3.1.128
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.13|Translation/ other/ based on similarity]
  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.4|Protein modification] → [category|SW 3.3.4.6|Protein acetylase/ deacetylase/ based on similarity]

    • Gene

    Coordinates
    1,260,811 1,261,356

    The protein

    Catalyzed reaction/ biological activity

  • Acetyl-CoA + ribosomal-protein L-alanine = CoA + ribosomal-protein N-acetyl-L-alanine (according to Swiss-Prot)

    • Protein family

  • [SW|Acetyltransferase family] (according to UniProt)

    • Paralogous protein(s)

  • [protein|BFDAB855DC76A78C100DC5E5FB81F73069F5F93F|YdaF]
  • [protein|F92B7EC7A00BF295666D68613932D239F92C7347|YkkB]:

    • Structure

  • [PDB|3IGR] (from Vibrio fischeri, 35% identity)

    • [SW|Localization]

  • cytoplasm (Homogeneous) [Pubmed|16479537]

    • Expression and Regulation

    Operons

    genes
    [gene|470824F73C8C9CF0519C1E536DBF19D8A93723CE|yjcL]-[gene|6072A6EF0766F3D1B1616A20CDC36CCDC6CBDA71|yjcK]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-B257 (yjcK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1256 NBRP B. subtilis, Japan]
  • GP1246 (''yjcK''::''cat''), available in [SW|Jrg Stlke]'s lab
  • GP1255 (''[gene|17C3F56CE859BCD7A282C144C46CC92D3506ABF6|acuA]''::''kan'' ''[gene|6072A6EF0766F3D1B1616A20CDC36CCDC6CBDA71|yjcK]''::''cat'' ''[gene|18FA5EFCD78C74296F9E52A64DA4A9D635944528|ynaD]''::''spec'' ''[gene|4A8360E50ADBA4CC859A64A72EBC0A07F70A1764|yoaA]''::''tet''), available in [SW|Jrg Stlke]'s lab
  • BP139 (''[gene|470824F73C8C9CF0519C1E536DBF19D8A93723CE|yjcL]-[gene|6072A6EF0766F3D1B1616A20CDC36CCDC6CBDA71|yjcK]''::''ermC''), available in [SW|Fabian Commichau]'s lab
  • BKE11890 ([gene|6072A6EF0766F3D1B1616A20CDC36CCDC6CBDA71|yjcK]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE11890 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATAGTGATCTCTCCGTT, downstream forward: _UP4_TAATAAAAGAAGCCGGACTA
  • BKK11890 ([gene|6072A6EF0766F3D1B1616A20CDC36CCDC6CBDA71|yjcK]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK11890 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATAGTGATCTCTCCGTT, downstream forward: _UP4_TAATAAAAGAAGCCGGACTA

    • References

  • 16479537,22383849